4690f18244d1815b4af37645895f387d *DESCRIPTION
a5a835dff46a5e2d6111d10752396a3f *INDEX
2793890d47578ac74fc11718a634b80c *Meta/Rd.rds
645f38a0780997a3f2a28991b10781e5 *Meta/hsearch.rds
97194724dc283aa5a070c8c4993abe70 *Meta/links.rds
bdff1fc3af98b61e43bdd92b8e3b6300 *Meta/package.rds
34209fa52858a9f31417cdd0bbc93a1d *NEWS
6e60a4480e0345d65902fc23b54bffd6 *R/aroma.tcga
90ebc1360d0b2cfd1de888fa8c4f372f *R/aroma.tcga.rdb
9fbe65ecae5d533ed2c65c0008a90425 *R/aroma.tcga.rdx
ff4808cb2a9151497df64187d9084535 *help/AnIndex
bc492dbc4ab0eb75ff997fab5494a830 *help/aliases.rds
cbd9e4ece43b30fd47278ae5f5f46847 *help/aroma.tcga.rdb
5c8abb7ee34b4a397b872af2bdfca4ac *help/aroma.tcga.rdx
335f15ca6ebe8daae942133254d74c9f *help/paths.rds
9a50dd42286a984e251a9569a8ef9940 *html/00Index.html
1c56a69d9e98f3b52bf347ddb7b79663 *testScripts/system/A1.download/1.buildDirectoryStubs.Rex
21fdebc8e4d53d9e3fa4028bff92a8d6 *testScripts/system/A1.download/2.download.Rex
bb2c75259a5f2e4b801cc478fbecd3af *testScripts/system/A1.download/3.downloadBCRTable.Rex
59ad2a499515fd016616190e846ab090 *testScripts/system/A1.download/TCGA,DCC,dirs,GBM.txt
4e0e033d140f0ddd64451452bbe3bcfc *testScripts/system/A1.download/TCGA,DCC,dirs,OV.txt
4822d9c244530b6fca4cfae37fab6e3f *testScripts/system/A2.createLinks/1.LinkRawDataToTCGAData.Rex
d1687a4f525cf4152fc397f9d2a1edc4 *testScripts/system/A3.import/1.import.Rex
61b09f0fe3665978605e21a58b0e6ce2 *testScripts/system/A4.CRMAv2/1.ASCRMAv2.Rex
6533986323bd3f52172fd26804fe2b07 *testScripts/system/A4.CRMAv2/3.import.Rex
a8ef08e3bee8b27f0abcf80226996f6b *testScripts/system/A4.CRMAv2/OV.Rex
727bcdd4635dba41e4371e395f9db12c *testScripts/system/B1.normalize/1.PrincipalCurveNormalization.Rex
18f92ad2ff5891efe1bd363193d631d3 *testScripts/system/B1.ratios/1.CalculateTumorNormalCnRatios.Rex
c632f932bd5d7f97776e612d6b0439bc *testScripts/system/B2.QC/1.PairedTumorNormalBAFs.Rex
f7aca65204228729cdf49215b4d7161c *testScripts/system/D1.scan/1.msTabulate.Rex
6eb1c789beec4afabaa673e1b83d0236 *testScripts/system/D2.MSCN/1.MSCN,batch.Rex
8b46cd233b253ce0e3ae0c36bc4dafa7 *testScripts/system/D2.MSCN/1.MSCN,presmooting.Rex
32a82a1612e7805db7e23d2e8e7d3c3b *testScripts/system/D2.MSCN/2.MSCN,subset.Rex
4267c38c67cb10623b64c5263c39cf77 *testScripts/system/D4.QC/1.MSCN,QC,tracks.Rex
89d26a02c0afbec891d23886d937a37d *testScripts/system/D9.export/1.export.Rex
f616506b17809caac97933cc8aed0871 *testScripts/system/E1.segmentation/1.CBS,subset.Rex
3310056485a1afc517b1f64cfa73aeb9 *testScripts/system/qc/test20090930,MSCN,QC,tracks.Rex
63bf70943695fe427665d30259a7d66d *testScripts/system/scan/test20090929,findSamples.Rex
